Search results for "Historical biogeography"

showing 5 items of 5 documents

Leaps and bounds: geographical and ecological distance constrained the colonisation of the Afrotemperate by Erica.

2018

Abstract Background The coincidence of long distance dispersal (LDD) and biome shift is assumed to be the result of a multifaceted interplay between geographical distance and ecological suitability of source and sink areas. Here, we test the influence of these factors on the dispersal history of the flowering plant genus Erica (Ericaceae) across the Afrotemperate. We quantify similarity of Erica climate niches per biogeographic area using direct observations of species, and test various colonisation scenarios while estimating ancestral areas for the Erica clade using parametric biogeographic model testing. Results We infer that the overall dispersal history of Erica across the Afrotemperate…

EvolutionClimateBiomeNicheBiologyHistorical biogeographyGeographical distanceQH359-425MadagascarAnimalsPhylogenetic biome conservatismCladeClimatic niche shiftEcology Evolution Behavior and SystematicsEcosystemPhylogenyEricaEcological nicheCape floristic regionSource–sink dynamicsEcologyGeographyEcologyModel testingEvolutionary radiationBiological EvolutionColonisationGeographyAfricaBiological dispersalAfrotemperateEricaceaeResearch ArticleBMC evolutionary biology
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Molecular and morphological data suggest weak phylogeographic structure in the fairy shrimp Streptocephalus torvicornis (Branchiopoda, Anostraca)

2017

Inland aquatic organisms almost ubiquitously display a pattern of marked provincialism characterized by substantial population differentiation and genealogical discontinuities. This is the result of strong priority effects and local adaptation following dispersal and colonization of new habitats. We present a case that defies this biogeographic paradigm. We have investigated the phylogeography of the fairy shrimp Streptocephalus torvicornis across its circum-Mediterranean and Eurasian distribution. Based on three independent datasets, namely sequence variation at 12S and 16S rRNA, cyst morphology and male second antenna characters, we discern a pattern of extensive genetic and morphological…

0106 biological sciencesInland watersPHYLOGENYOutbreeding depressionPopulationSettore BIO/05 - ZoologiaZoologyBranchiopodaGENE-SEQUENCESAquatic SciencePopulation structureGenetic differentiation010603 evolutionary biology01 natural sciencesCOLONIZATIONMale antennaDISPERSALHISTORICAL BIOGEOGRAPHYWAGAeducationInland waterLocal adaptationGenetic diversityeducation.field_of_studybiologyEcology010604 marine biology & hydrobiologyCyst morphologyAQUATIC ORGANISMSbiology.organism_classificationMitochondrial DNAEVOLUTIONMODELPhylogeographyCRUSTACEAAnostracaBiological dispersal
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Taxas de substituições das Annonaceas: uma perspectiva do modelo códon

2014

The Annonaceae includes cultivated species of economic interest and represents an important source of information for better understanding the evolution of tropical rainforests. In phylogenetic analyses of DNA sequence data that are used to address evolutionary questions, it is imperative to use appropriate statistical models. Annonaceae are cases in point: Two sister clades, the subfamilies Annonoideae and Malmeoideae, contain the majority of Annonaceae species diversity. The Annonoideae generally show a greater degree of sequence divergence compared to the Malmeoideae, resulting in stark differences in branch lengths in phylogenetic trees. Uncertainty in how to interpret and analyse these…

Nonsynonymous substitutionmodelo códondiversificationcomprimentos dos ramosSynonymous substitution ratecharactersfilogenéticaAnnonaceaePlant Sciencelcsh:Plant cultureDNA sequencinggeneraMolecular evolutionPhylogeneticsCodon modelsphylogeny reconstructionLaboratorium voor Moleculaire Biologielcsh:SB1-1110patternsCladeNon-synonymous substitutionNdhFGeneticsflowering plantsPhylogenetic treebiologyhistorical biogeographymolecular evolutionBiology and Life Sciencesbiology.organism_classificationBiosystematiekratePhylogeneticsAnnonaceaesubstituições não-sinônimassubstituições sinônimasBiosystematicsBranch lengthsNon-synonymous substitution ratemaximum-likelihoodLaboratory of Molecular BiologyEPSAgronomy and Crop ScienceFood Sciencenucleotide substitution
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Multilocus phylogenetics of smooth clam shrimps (Branchiopoda, Laevicaudata)

2021

International audience; Laevicaudatan branchiopods, also called ‘smooth clam shrimps’ or ’pea shrimps’, are rare crustaceans found exclusively in temporary, small freshwater bodies, which stay dry most of the year. Only 42 laevicaudatan species have been described so far, 90% of which belong to the genus Lynceus. The first multilocus phylogeny of the group is provided here, based on 15 Lynceus species from North and South America, Europe, Africa, Asia, Australia and New Caledonia and using nine molecular markers (two mitochondrial and seven nuclear genes, including newly designed primers). Genetic data suggest populations of Lynceus brachyurus from Europe and North America to represent a co…

0106 biological sciencesSystematicsSpecies complexLaevicaudataZoologyBiology[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy010603 evolutionary biology01 natural sciences03 medical and health sciencesGenusGeneticsVicariance14. Life underwaterCladeMolecular clockMolecular BiologyEcology Evolution Behavior and Systematics030304 developmental biology0303 health sciencesGondwanahistorical biogeographymolecular clock[SDV.BA.ZI]Life Sciences [q-bio]/Animal biology/Invertebrate ZoologyTaxonSister groupBiogeografiaAnimal Science and ZoologySouthern Hemisphere
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Parallel diversifications of Cremastosperma and mosannona (annonaceae), tropical rainforest trees tracking neogene upheaval of South America

2018

Much of the immense present day biological diversity of Neotropical rainforests originated from the Miocene onwards, a period of geological and ecological upheaval in South America. We assess the impact of the Andean orogeny, drainage of Lake Pebas and closure of the Panama isthmus on two clades of tropical trees ( Cremastosperma , ca 31 spp.; and Mosannona , ca 14 spp.; both Annonaceae). Phylogenetic inference revealed similar patterns of geographically restricted clades and molecular dating showed diversifications in the different areas occurred in parallel, with timing consistent with Andean vicariance and Central American geodispersal. Ecological niche modelling approaches show phyloge…

0106 biological sciences0301 basic medicineDIVERSITY01 natural sciencesNiche modellingDISPERSALlcsh:ScienceMultidisciplinarybiologyEcologyAmazon rainforest70Biology (Whole Organism)ANDEAN UPLIFTPE&RCBiosystematieknicheGeographyGeodispersalinternationalISTHMUSMolecular datingCLADESPebas systemResearch Article1001Neotropics201004PHYLOGENY RECONSTRUCTIONRainforest010603 evolutionary biologymodelling03 medical and health sciencesHISTORICAL BIOGEOGRAPHYDIVERGENCEVicarianceSPECIATIONLaboratorium voor NematologieEcological nicheAndean orogenyAndean orogenyBiology and Life Sciencesbiology.organism_classificationEVOLUTION030104 developmental biologyMosannonaPanama isthmusBiosystematicslcsh:QEPSLaboratory of NematologyTropical rainforestRoyal Society Open Science
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